Publications of Gunes Ercal

Journal Articles

• "Comparing the Speed and Accuracy of Approaches to Betweenness Centrality Approximation," Computational Social Networks, 2019, Volume 6, Issue 1.
     with John Matta and Koushik Sinha
  
  
• "Applications of Node-Based Resilience Graph-Theoretic Framework to Clustering Autism Spectrum Disorders Phenotypes," Applied Network Science, 2018, Special Issue Network Medicine in the era of Big Data in Science and Healthcare.
     with John Matta, Junya Zhao, and Tayo Obafemi-Ajayi
  
  
• "Node-Based Resilience Measure Clustering with Applications to Noisy and Overlapping Communities in Complex Networks," Applied Sciences, 2018, Special Issue Complex Networks and Machine Learning: From Molecular to Social Sciences.
     with J. Matta, T. Obafemi-Ajayi, J. Borwey, K. Sinha, and D. Wunsch
  
  
• "The Vertex Attack Tolerance of Complex Networks," RAIRO Operations Research, 2017, Volume 51, Number 4.
     with John Matta and Jeffrey Borwey
  
  
• "The Diversity of REcent and Ancient huMan (DREAM): a new microarray for genetic anthropology and genealogy, forensics, and personalized medicine" Genome Biology and Evolution, 2017, Volume 9, Issue 12.
     with E. Elhaik, L. Yusuf, A.I.J. Anderson, M. Pirooznia, D. Arnellos, G. Vilshansky, Y. Lu, T. Webster, M. L. Baird, and U. Esposito
  
  
• "The Quality of Sampling from Geographic Networks," International Journal of Distributed Sensor Networks, 2016, Volume 12, Number 4.
     with John Matta and William Stimson
  
  
• "The Price of Mediation," Discrete Mathematics and Theoretical Computer Science, 2014, Volume 16, Number 1.
     with Milan Bradonjic, Adam Meyerson, and Alan Roytman
  
  
• "Simulating retrieval from a highly clustered network: implications for spoken word recognition," Frontiers in Psychology, 2011, Volume 2, Number 369.
     with Michael S. Vitevitch and Bhargav Adagarla
  
  
• "VCG with Communities on Random Ad Hoc Networks," International Journal of Distributed Sensor Networks, 2011.
     with Rafit Izhak-Ratzin, Rupak Majumdar, and Adam Meyerson
  
  
• "Incentive Compatible and Globally Efficient Position Based Routing for Selfish Reverse Multicast in Wireless Sensor Networks," Algorithms, 2009, Volume 2, Number 4.
     with Stephan Eidenbenz, Adam Meyerson, Allon Percus, and Sarvesh Varatharajan
  
  
• "On the Cover Time and Mixing Time of Random Geometric Graphs," Theoretical Computer Science 2007, Volume 380, Issues 1-2.
     with Chen Avin

Conference Proceedings and Preprints

• Analysis of Grapevine Gene Expression Data using Node-Based Resilience Clustering, IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, 2018.
     with Jeffrey Dale, John Matta, Susanne Howard, Wenping Qiu, and Tayo Obafemi-Ajayi
  
  
• Applications of Novel Graph Theoretic Methods to Clustering Autism Spectrum Disorders Phenotypes, 9th International Conference on Bioinformatics and Computational Biology, 2017.
     with John Matta, Thy Nguyen, and Tayo Obafemi-Ajayi
  
  
• Robust Graph-Theoretic Clustering Approaches Using Node-Based Resilience Measures, IEEE International Conference on Data Mining, 2016.
     with John Matta, Tayo Obafemi-Ajayi, Jeffrey Borwey, and Donald Wunsch
  
  
• A Note on the Computational Complexity of Unsmoothened Vertex Attack Tolerance, CoRR abs/1603.08430, 2016
  
  
• A Graph-Theoretic Clustering Methodology Based on Vertex Attack Tolerance, Florida Artificial Intelligence Research Society Conference, AAAI Press, 2015.
     with Jeffrey Borwey, Darla Ahlert, and Tayo Obafemi-Ajayi
  
  
• A Comparative Analysis of Progressive Multiple Sequence Alignment Approaches using UPGMA and Neighbor Joining based Guide Trees, CoRR abs/1509.03530, 2015.
     with Ravi Kumar Yadav Dega
  
  
• On Vertex Attack Tolerance in Regular graphs, CoRR abs/1409.2172, 2014
  
  
• Comparative Resilience Notions and Vertex Attack Tolerance of Scale-Free Networks, CoRR abs/1404.0103, 2014
     with John Matta and Jeffrey Borwey
  
  
• Resilience Notions for Scale-Free Networks, Complex Adaptive Systems 2013.
     with John Matta
  
  
• On the Quality of Sampling from Geographic Networks, Complex Adaptive Systems 2013.
     with John Matta, William Stimson, and Dominic Eccher
  
  
• "Small Worlds and Rapid Mixing with a Little More Randomness on Random Geometric Graphs," Networking 2011.
  
  
• "User Groups in Social Networks: An Experimental Study on YouTube," Hawaii International Conference on System Science (HICSS) 2011.
     with Michael Steve Stanley Laine and Bo Luo
  
  
• "On the Price of Mediation," ACM Conference on Electronic Commerce (EC) 2009.
     with Milan Bradonjic, Adam Meyerson, and Alan Roytman
  
  
• "On a Local Heuristic for a Reverse Multicast Forwarding Game," First Workshop on Applications of Graph Theory in Wireless Ad-Hoc Networks and Sensor Networks (Graph-Hoc) 2009.
     with Sarvesh Varatharajan
  
  
• "On a Locally Minimum Cost Forwarding Game," ACM International Workshop on Foundations of Wireless Ad-Hoc and Sensor Networking and Computing (FOWANC) 2009.
     with Stephan Eidenbenz, Adam Meyerson, and Allon Percus
  
  
• "Frugal Routing on Wireless Ad-Hoc Networks," Symposium on Algorithmic Game Theory (SAGT) 2008.
     with Rafit Izhak-Ratzin, Rupak Majumdar, and Adam Meyerson
  
  
• "On the Cover Time of Random Geometric Graphs," International Colloquium on Automata, Languages, and Programming (ICALP) 2005.
     with Chen Avin
  
  
• "Bounds on the Mixing Time and Partial Cover of Ad-Hoc and Sensor Networks," European Workshop on Wireless Sensor Networks (EWSN) 2005.
     with Chen Avin
  
  
• "On No-Regret Learning, Fictitious Play, and Nash Equilibrium," International Conference on Machine Learning (ICML) 2001.
     with Amir Jafari, Amy Greenwald, and David Gondek